ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5vimA1 - ECOD Domain | ECOD

ECOD/Domains/e5vimA1

e5vimA1

UID: 002114577

PDB

Range: A:5-265
PDB: 5VIM chain A(all domains)
UniProt: Q32ZE1 (all domains)

Molecule: Methyltransferase

3D Structure

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Related Domains

Browse other domains in FtsJ →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyFtsJ(2003.1.5.15)

Ligands

in contact, ≤ 4 Å

AdemetionineSAM
drugDrugBank DB00118

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer.

Pfam Families

FtsJ-like methyltransferase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 5VIM RCSB PDB: 5VIM PDBe: 5VIM UniProt: Q32ZE1

Downloads

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Drug annotations from DrugDomain.