ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1w3rA1 - ECOD Domain | ECOD

ECOD/Domains/e1w3rA1

e1w3rA1

UID: 000021156

PDB

Range: A:2-195
PDB: 1W3R chain A(all domains)
UniProt: Q9RW27 (all domains)
Gene: DR_0842

Molecule: NIMA-RELATED PROTEIN

3D Structure

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Related Domains

Browse other domains in Pyridox_ox_2 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupFMN-binding split barrel(1.1.5)

FFamilyPyridox_ox_2(1.1.5.31)

Ligands

in contact, ≤ 4 Å

Metronidazole2MN
drugDrugBank DB00916
Pyruvic acidPYR
drugDrugBank DB00119

+ 1 additive (Acetate)

Pfam Families

PF12900Pyridox_ox_2

Pyridoxamine 5'-phosphate oxidase

ClanCL0336FMN-binding

External Links

ECOD PDB View: 1W3R RCSB PDB: 1W3R PDBe: 1W3R UniProt: Q9RW27

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

AcetateACT

DrugBank DB14511

Shown in the structure viewer. Drug annotations from DrugDomain.