ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ltsB1 - ECOD Domain | ECOD

ECOD/Domains/e5ltsB1

e5ltsB1

UID: 002116986

PDB

Range: B:1-191
PDB: 5LTS chain B(all domains)
UniProt: P14240 (all domains)
Gene: L

Molecule: RNA-directed RNA polymerase L

3D Structure

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Related Domains

Browse other domains in ArenaCapSnatch →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRestriction endonuclease-like(2008)

HH-groupRestriction endonuclease-like(2008.1)

TT-groupRestriction endonuclease-like(2008.1.1)

FFamilyArenaCapSnatch(2008.1.1.66)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
Sodium ionNA
metal

+ 1 additive (Glycerin)

GlycerinGOL

Pfam Families

PF17296ArenaCapSnatch

Arenavirus cap snatching domain

ClanCL0236PDDEXK

External Links

ECOD PDB View: 5LTS RCSB PDB: 5LTS PDBe: 5LTS UniProt: P14240

Downloads

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DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.