ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5nf0A1 - ECOD Domain | ECOD

ECOD/Domains/e5nf0A1

e5nf0A1

UID: 002117113

PDB

Range: A:1-114
PDB: 5NF0 chain A(all domains)
UniProt: Q9HYN5 (all domains)
Gene: lecB

Molecule: Fucose-binding lectin II (PA-IIL)

3D Structure

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Related Domains

Browse other domains in PA-IIL →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupCalcium-mediated lectin(10.6)

TT-groupCalcium-mediated lectin(10.6.1)

FFamilyPA-IIL(10.6.1.1)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
3,7-anhydro-2,8-dideoxy-L-glycero-D-gluco-octonic acidZDC
within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Fucose-binding lectin II (PA-IIL)

External Links

ECOD PDB View: 5NF0 RCSB PDB: 5NF0 PDBe: 5NF0 UniProt: Q9HYN5

Downloads

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