ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5t2tA1 - ECOD Domain | ECOD

ECOD/Domains/e5t2tA1

e5t2tA1

UID: 002117356

PDB

Range: A:1-188
PDB: 5T2T chain A(all domains)
UniProt: P14240 (all domains)
Gene: L

Molecule: RNA-directed RNA polymerase L

3D Structure

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Related Domains

Browse other domains in ArenaCapSnatch →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRestriction endonuclease-like(2008)

HH-groupRestriction endonuclease-like(2008.1)

TT-groupRestriction endonuclease-like(2008.1.1)

FFamilyArenaCapSnatch(2008.1.1.66)

Ligands

in contact, ≤ 4 Å

(2Z)-4-[1-benzyl-4-(4-chlorobenzyl)piperidin-4-yl]-2-hydroxy-4-oxobut-2-enoic acid0N8
MANGANESE (II) IONMN
metal

+ 1 additive (Glycerin)

Glycerin

Pfam Families

PF17296ArenaCapSnatch

Arenavirus cap snatching domain

ClanCL0236PDDEXK

External Links

ECOD PDB View: 5T2T RCSB PDB: 5T2T PDBe: 5T2T UniProt: P14240

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.