ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5xthW1 - ECOD Domain | ECOD

ECOD/Domains/e5xthW1

e5xthW1

UID: 002117735

PDB

Range: W:7-144
PDB: 5XTH chain W(all domains)
UniProt: Q9P0J0 (all domains)
Gene: NDUFA13

Molecule: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13

3D Structure

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Related Domains

Browse other domains in GRIM-19 →

Classification

AArchitectureextended segments(a.20)

XX-groupMitochondrial complex I, B16.6 subunit(1132)

HH-groupMitochondrial complex I, B16.6 subunit(1132.1)

TT-groupMitochondrial complex I, B16.6 subunit(1132.1.1)

FFamilyGRIM-19(1132.1.1.1)

Ligands

in contact, ≤ 4 Å

PhosphatidylethanolaminePEE
drugDrugBank DB04327
(9R,11S)-9-({[(1S)-1-HYDROXYHEXADECYL]OXY}METHYL)-2,2-DIMETHYL-5,7,10-TRIOXA-2LAMBDA~5~-AZA-6LAMBDA~5~-PHOSPHAOCTACOSANE-6,6,11-TRIOLPLX

Shown in the structure viewer. Drug annotations from .

Pfam Families

PF06212GRIM-19

GRIM-19 protein

External Links

ECOD PDB View: 5XTH RCSB PDB: 5XTH PDBe: 5XTH UniProt: Q9P0J0

Downloads

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