ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5xtiAU2 - ECOD Domain | ECOD

ECOD/Domains/e5xtiAU2

e5xtiAU2

UID: 002117936

PDB

Range: AU:280-325
PDB: 5XTI chain AU(all domains)
UniProt: P08574 (all domains)
Gene: CYC1

Molecule: Cytochrome c1, heme protein, mitochondrial

3D Structure

Loading viewer...

Related Domains

Browse other domains in Cytochrom_C1 →

Classification

AArchitectureextended segments(a.20)

XX-groupcytochrome c1 transmembrane anchor(5013)

HH-groupcytochrome c1 transmembrane anchor(5013.1)

TT-groupcytochrome c1 transmembrane anchor(5013.1.1)

FFamilyCytochrom_C1(5013.1.1.1)

Ligands

in contact, ≤ 4 Å

Tetrastearoyl cardiolipinCDL
drugDrugBank DB03429
PhosphatidylethanolaminePEE
drugDrugBank DB04327

Pfam Families

PF02167Cytochrom_C1

Cytochrome C1 family

ClanCL0318Cytochrome-c

External Links

ECOD PDB View: 5XTI RCSB PDB: 5XTI PDBe: 5XTI UniProt: P08574

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

(9R,11S)-9-({[(1S)-1-HYDROXYHEXADECYL]OXY}METHYL)-2,2-DIMETHYL-5,7,10-TRIOXA-2LAMBDA~5~-AZA-6LAMBDA~5~-PHOSPHAOCTACOSANE-6,6,11-TRIOL

within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.