ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1m2tB1 - ECOD Domain | ECOD

ECOD/Domains/e1m2tB1

e1m2tB1

UID: 000002118

RepresentativePDB

Range: B:249-384
PDB: 1M2T chain B(all domains)
UniProt: P81446 (all domains)

Molecule: mistletoe lectin I B chain

3D Structure

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Related Domains

Browse other domains in Ricin_B_lectin →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-Trefoil(6)

HH-groupbeta-Trefoil(6.1)

TT-groupbeta-Trefoil(6.1.1)

FFamilyRicin_B_lectin(6.1.1.4)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer.

Pfam Families

PF00652Ricin_B_lectin

Ricin-type beta-trefoil lectin domain

ClanCL0066Trefoil

External Links

ECOD PDB View: 1M2T RCSB PDB: 1M2T PDBe: 1M2T UniProt: P81446

Downloads

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Drug annotations from DrugDomain.