ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5hazA1 - ECOD Domain | ECOD

ECOD/Domains/e5hazA1

e5hazA1

UID: 002121147

PDB

Range: A:852-1416
PDB: 5HAZ chain A(all domains)
UniProt: G0S7B6 (all domains)
Gene: NUP170

Molecule: Nucleoporin NUP170

3D Structure

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Related Domains

Browse other domains in Nucleoporin_C →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupNuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains(109.26)

TT-groupNuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains(109.26.1)

FFamilyNucleoporin_C(109.26.1.1)

Ligands

in contact, ≤ 4 Å

Sodium ionNA
metal

+ 2 additives (HEPES, 1,2-ETHANEDIOL)

HEPESEPE
DrugBank DB16872
1,2-ETHANEDIOLEDO

Pfam Families

PF03177Nucleoporin_C

Non-repetitive/WGA-negative nucleoporin C-terminal

ClanCL0020TPR

External Links

ECOD PDB View: 5HAZ RCSB PDB: 5HAZ PDBe: 5HAZ UniProt: G0S7B6

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.