ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5lv4A1 - ECOD Domain | ECOD

ECOD/Domains/e5lv4A1

e5lv4A1

UID: 002121360

PDB

Range: A:56-189
PDB: 5LV4 chain A(all domains)
UniProt: Q6NZB1 (all domains)
Gene: Prmt6

Molecule: Protein arginine N-methyltransferase 6

3D Structure

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Related Domains

Browse other domains in Methyltransf_25 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyMethyltransf_25(2003.1.5.81)

Ligands

in contact, ≤ 4 Å

(2~{R})-4-[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl-[[4-azanyl-1-(methoxymethyl)-2-oxidanylidene-pyrimidin-5-yl]methyl]amino]-2-azanyl-butanoic acid78K

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF13649Methyltransf_25

Methyltransferase domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 5LV4 RCSB PDB: 5LV4 PDBe: 5LV4 UniProt: Q6NZB1

Downloads

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