ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5mf2B2 - ECOD Domain | ECOD

ECOD/Domains/e5mf2B2

e5mf2B2

UID: 002121381

PDB

Range: B:1-83,B:171-204
PDB: 5MF2 chain B(all domains)
UniProt: Q6QGE8 (all domains)
Gene: D16

Molecule: Distal tail protein

3D Structure

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Related Domains

Browse other domains in DTP-pb9_A-dom_C,DTP-pb9_A-dom_N →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupPhage tail proteins(1.1.13)

FFamilyDTP-pb9_A-dom_C,DTP-pb9_A-dom_N(1.1.13.24)

Ligands

in contact, ≤ 4 Å

TERBIUM(III) IONTB
metal
Chloride ionCL
within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF21424DTP-pb9_A-dom_C

Distal tail protein pb9, A domain C-terminal

ClanCL0504Phage_barrel

PF21425DTP-pb9_A-dom_N

Distal tail protein pb9, A domain, N-terminal

ClanCL0504Phage_barrel

External Links

ECOD PDB View: 5MF2 RCSB PDB: 5MF2 PDBe: 5MF2 UniProt: Q6QGE8

Downloads

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