ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5nswB1 - ECOD Domain | ECOD

ECOD/Domains/e5nswB1

e5nswB1

UID: 002121411

PDB

Range: B:1-445
PDB: 5NSW chain B(all domains)
UniProt: Q9I0Y7 (all domains)
Gene: oprN

Molecule: Multidrug efflux outer membrane protein OprN

3D Structure

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Related Domains

Browse other domains in OEP →

Classification

AArchitecturea+b duplicates or obligate multimers(a.15)

XX-groupOuter membrane efflux proteins (OEP)(5085)

HH-groupOuter membrane efflux proteins (OEP)(5085.1)

TT-groupOuter membrane efflux proteins (OEP)(5085.1.1)

FFamilyOEP(5085.1.1.1)

Ligands

in contact, ≤ 4 Å

Palmitic AcidPLM
drugDrugBank DB03796
Sodium ionNA
metal
XenonXE

Pfam Families

Outer membrane efflux protein

External Links

ECOD PDB View: 5NSW RCSB PDB: 5NSW PDBe: 5NSW UniProt: Q9I0Y7

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 1 additive (octyl beta-D-glucopyranoside)

octyl beta-D-glucopyranosideBOG

Shown in the structure viewer. Drug annotations from DrugDomain.