ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5nx4B1 - ECOD Domain | ECOD

ECOD/Domains/e5nx4B1

e5nx4B1

UID: 002121542

PDB

Range: B:4-304
PDB: 5NX4 chain B(all domains)
UniProt: D5SL78 (all domains)
Gene: SCLAV_p1185

Molecule: Pentalenene synthase

3D Structure

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Related Domains

Browse other domains in Terpene_syn_C_2 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupTerpenoid synthases(141)

HH-groupTerpenoid synthases(141.1)

TT-groupTerpenoid synthases(141.1.1)

FFamilyTerpene_syn_C_2(141.1.1.8)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF19086Terpene_syn_C_2

Terpene synthase family 2, C-terminal metal binding

ClanCL0613Terp_synthase

External Links

ECOD PDB View: 5NX4 RCSB PDB: 5NX4 PDBe: 5NX4 UniProt: D5SL78

Downloads

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