ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5m4oH2 - ECOD Domain | ECOD

ECOD/Domains/e5m4oH2

e5m4oH2

UID: 002123057

PDB

Range: H:9-169
PDB: 5M4O chain H(all domains)
UniProt: F8TW83 (all domains)
Gene: hqdB

Molecule: Hydroquinone dioxygenase large subunit

3D Structure

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Related Domains

Browse other domains in PnpCD_PnpD_N →

Classification

AArchitecturea+b two layers(a.11)

XX-groupssDNA-binding transcriptional regulator domain-like(295)

HH-groupssDNA-binding transcriptional regulator domain(295.1)

TT-groupssDNA-binding transcriptional regulator domain(295.1.1)

FFamilyPnpCD_PnpD_N(295.1.1.10)

Ligands

in contact, ≤ 4 Å

P-NitrophenolNPO
drugDrugBank DB04417
FE (III) IONFE
metalwithin 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF18191PnpCD_PnpD_N

Hydroquinone 1,2-dioxygenase large subunit N-terminal

External Links

ECOD PDB View: 5M4O RCSB PDB: 5M4O PDBe: 5M4O UniProt: F8TW83

Downloads

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