ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5no0A1 - ECOD Domain | ECOD

ECOD/Domains/e5no0A1

e5no0A1

UID: 002123151

PDB

Range: A:307-409
PDB: 5NO0 chain A(all domains)
UniProt: P20062 (all domains)
Gene: TCN2

Molecule: Transcobalamin-2

3D Structure

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Related Domains

Browse other domains in DUF4430 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupUbiquitin-like(221.1.1)

FFamilyDUF4430(221.1.1.50)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF14478DUF4430

Domain of unknown function (DUF4430)

ClanCL0072Ubiquitin

External Links

ECOD PDB View: 5NO0 RCSB PDB: 5NO0 PDBe: 5NO0 UniProt: P20062

Downloads

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