ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5vdpA1 - ECOD Domain | ECOD

ECOD/Domains/e5vdpA1

e5vdpA1

UID: 002123311

PDB

Range: A:396-521
PDB: 5VDP chain A(all domains)
UniProt: Q8N884 (all domains)
Gene: CGAS

Molecule: Cyclic GMP-AMP synthase

3D Structure

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Related Domains

Browse other domains in Mab-21_C →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHhH/H2TH(102)

HH-groupSAM/DNA-glycosylase(102.1)

TT-groupPAP/OAS1 substrate-binding domain(102.1.3)

FFamilyMab-21_C(102.1.3.8)

Ligands

in contact, ≤ 4 Å

cGAMP1SY
Zinc ionZN
metal

+ 1 additive (Sulfate ion)

Sulfate ionSO4

Shown in the structure viewer.

Pfam Families

PF20266Mab-21_C

Mab-21 protein HhH/H2TH-like domain

External Links

ECOD PDB View: 5VDP RCSB PDB: 5VDP PDBe: 5VDP UniProt: Q8N884

Downloads

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Drug annotations from DrugDomain.