ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5vdpB2 - ECOD Domain | ECOD

ECOD/Domains/e5vdpB2

e5vdpB2

UID: 002123314

PDB

Range: B:160-395
PDB: 5VDP chain B(all domains)
UniProt: Q8N884 (all domains)
Gene: CGAS

Molecule: Cyclic GMP-AMP synthase

3D Structure

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Related Domains

Browse other domains in Mab-21 →

Classification

AArchitecturea+b three layers(a.12)

XX-groupNucleotidyltransferase-like(316)

HH-groupNucleotidyltransferase(316.1)

TT-groupNucleotidyltransferase(316.1.1)

FFamilyMab-21(316.1.1.6)

Ligands

in contact, ≤ 4 Å

cGAMP1SY
Zinc ionZN
metal

+ 1 additive (Sulfate ion)

Sulfate ionSO4

Shown in the structure viewer.

Pfam Families

Mab-21 protein nucleotidyltransferase domain

ClanCL0260NTP_transf

External Links

ECOD PDB View: 5VDP RCSB PDB: 5VDP PDBe: 5VDP UniProt: Q8N884

Downloads

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Drug annotations from DrugDomain.