ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4b8vA2 - ECOD Domain | ECOD

ECOD/Domains/e4b8vA2

e4b8vA2

UID: 002124476

PDB

Range: A:7-141
PDB: 4B8V chain A(all domains)
UniProt: B3VBK9 (all domains)
Gene: ECP6

Molecule: EXTRACELLULAR PROTEIN 6

3D Structure

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Related Domains

Browse other domains in LysM →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupLysM domain(101.15)

TT-groupLysM domain(101.15.1)

FFamilyLysM(101.15.1.1)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

LysM domain

ClanCL0187LysM

External Links

ECOD PDB View: 4B8V RCSB PDB: 4B8V PDBe: 4B8V UniProt: B3VBK9

Downloads

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