ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1qbzB1 - ECOD Domain | ECOD

ECOD/Domains/e1qbzB1

e1qbzB1

UID: 002127141

PDB

Range: B:28-35,B:57-149
PDB: 1QBZ chain B(all domains)
UniProt: Q88007 (all domains)
Gene: env

Molecule: PROTEIN (SIV GP41 ECTODOMAIN)

3D Structure

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Related Domains

Browse other domains in GP41 →

Classification

AArchitecturea+b duplicates or obligate multimers(a.15)

XX-groupMPER trimer(3567)

HH-groupMPER trimer(3567.1)

TT-groupMPER trimer(3567.1.1)

FFamilyGP41(3567.1.1.2)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
(4R)-2-METHYLPENTANE-2,4-DIOLMRD
MERCURY (II) IONHG

Pfam Families

Retroviral envelope protein

External Links

ECOD PDB View: 1QBZ RCSB PDB: 1QBZ PDBe: 1QBZ UniProt: Q88007

Downloads

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metal

within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.