ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3vmoA1 - ECOD Domain | ECOD

ECOD/Domains/e3vmoA1

e3vmoA1

UID: 002127527

PDB

Range: A:593-732
PDB: 3VMO chain A(all domains)
UniProt: Q54443 (all domains)
Gene: dexA

Molecule: Dextranase

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_66 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupGlycosyl hydrolase domain-like(12)

HH-groupGlycosyl hydrolase domain(12.1)

TT-groupGlycosyl hydrolase domain(12.1.1)

FFamilyGlyco_hydro_66(12.1.1.21)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Phosphate ion)

Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF13199Glyco_hydro_66

Glycosyl hydrolase family 66

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 3VMO RCSB PDB: 3VMO PDBe: 3VMO UniProt: Q54443

Downloads

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