ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5aegA1 - ECOD Domain | ECOD

ECOD/Domains/e5aegA1

e5aegA1

UID: 002127972

PDB

Range: A:230-585
PDB: 5AEG chain A(all domains)
UniProt: P32138 (all domains)
Gene: yihQ

Molecule: ALPHA-GLUCOSIDASE YIHQ

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_31_2nd →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyGlyco_hydro_31_2nd(2002.1.1.45)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

+ 1 additive ((4S)-2-METHYL-2,4-PENTANEDIOL)

(4S)-2-METHYL-2,4-PENTANEDIOLMPD

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01055Glyco_hydro_31_2nd

Glycosyl hydrolases family 31 TIM-barrel domain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 5AEG RCSB PDB: 5AEG PDBe: 5AEG UniProt: P32138

Downloads

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