ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5ejkH2 - ECOD Domain | ECOD

ECOD/Domains/e5ejkH2

e5ejkH2

UID: 002127997

PDB

Range: H:45-215
PDB: 5EJK chain H(all domains)
UniProt: P03354 (all domains)
Gene: gag-pol

Molecule: Gag-Pro-Pol polyprotein

3D Structure

Loading viewer...

Related Domains

Browse other domains in rve →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyrve(2484.1.1.9)

Pfam Families

Integrase core domain

ClanCL0219RNase_H

External Links

ECOD PDB View: 5EJK RCSB PDB: 5EJK PDBe: 5EJK UniProt: P03354

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure