ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4z4qB4 - ECOD Domain | ECOD

ECOD/Domains/e4z4qB4

e4z4qB4

UID: 002128246

PDB

Range: B:415-640
PDB: 4Z4Q chain B(all domains)
UniProt: P72525 (all domains)
Gene: parC

Molecule: DNA topoisomerase 4 subunit B,DNA topoisomerase 4 subunit A

3D Structure

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Related Domains

Browse other domains in DNA_gyraseB_C,Toprim →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHAD domain-like(2006)

HH-groupHAD domain-related(2006.1)

TT-groupToprim domain(2006.1.3)

FFamilyDNA_gyraseB_C,Toprim(2006.1.3.1)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal
3-amino-7-{(3R)-3-[(1S)-1-aminoethyl]pyrrolidin-1-yl}-1-cyclopropyl-6-fluoro-8-methylquinazoline-2,4(1H,3H)-dionePDQ

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00986DNA_gyraseB_C

DNA gyrase B subunit, carboxyl terminus

Toprim domain

ClanCL0413Toprim-like

External Links

ECOD PDB View: 4Z4Q RCSB PDB: 4Z4Q PDBe: 4Z4Q UniProt: P72525

Downloads

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