ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5odzB2 - ECOD Domain | ECOD

ECOD/Domains/e5odzB2

e5odzB2

UID: 002129328

PDB

Range: B:23-64,B:162-265
PDB: 5ODZ chain B(all domains)
UniProt: F6KZJ2 (all domains)
Gene: blaOXA-163

Molecule: Beta-lactamase

3D Structure

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Related Domains

Browse other domains in Transpeptidase →

Classification

AArchitecturea+b three layers(a.12)

XX-groupProfilin-like(223)

HH-groupa+b domain in beta-lactamase/transpeptidase-like proteins(223.3)

TT-groupa+b domain in beta-lactamase/transpeptidase-like proteins(223.3.1)

FFamilyTranspeptidase(223.3.1.3)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00905Transpeptidase

Penicillin binding protein transpeptidase domain

ClanCL0013Beta-lactamase

External Links

ECOD PDB View: 5ODZ RCSB PDB: 5ODZ PDBe: 5ODZ UniProt: F6KZJ2

Downloads

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