ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5v6nC2 - ECOD Domain | ECOD

ECOD/Domains/e5v6nC2

e5v6nC2

UID: 002129506

PDB

Range: C:186-317
PDB: 5V6N chain C(all domains)
UniProt: Q7NDN8 (all domains)
Gene: glvI

Molecule: Proton-gated ion channel

3D Structure

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Related Domains

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Classification

AArchitecture—

XX-group—

HH-group—

TT-group—

FFamily—

Ligands

in contact, ≤ 4 Å

Sodium ionNA
metal

+ 2 additives (Sulfate ion, Dodecyl-beta-d-maltoside)

Sulfate ionSO4
DrugBank DB14546
Dodecyl-beta-d-maltosideLMT

External Links

ECOD PDB View: 5V6N RCSB PDB: 5V6N PDBe: 5V6N UniProt: Q7NDN8

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.