ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5vifA1 - ECOD Domain | ECOD

ECOD/Domains/e5vifA1

e5vifA1

UID: 002129558

PDB

Range: A:827-1027
PDB: 5VIF chain A(all domains)
UniProt: O15294 (all domains)
Gene: OGT

Molecule: UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit

3D Structure

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Related Domains

Browse other domains in Glyco_transf_41 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupUDP-Glycosyltransferase/glycogen phosphorylase(7512)

HH-groupUDP-Glycosyltransferase/glycogen phosphorylase(7512.1)

TT-groupUDP-Glycosyltransferase/glycogen phosphorylase(7512.1.1)

FFamilyGlyco_transf_41(7512.1.1.33)

Ligands

in contact, ≤ 4 Å

Uridine-5'-DiphosphateUDP
drugDrugBank DB03435
2-{[(2E)-4-chlorobut-2-enoyl]amino}-2-deoxy-beta-D-glucopyranose9C1

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF13844Glyco_transf_41

Glycosyl transferase family 41

ClanCL0113GT-B

External Links

ECOD PDB View: 5VIF RCSB PDB: 5VIF PDBe: 5VIF UniProt: O15294

Downloads

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