ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5vydA1 - ECOD Domain | ECOD

ECOD/Domains/e5vydA1

e5vydA1

UID: 002129588

PDB

Range: A:22-335
PDB: 5VYD chain A(all domains)
UniProt: F2TZN0 (all domains)
Gene: PTSG_02023

Molecule: Phosphodiesterase

3D Structure

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Related Domains

Browse other domains in PDEase_I →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupPDEase-like(131)

HH-groupHD-domain/PDEase-like(131.1)

TT-groupHD-domain/PDEase-like(131.1.1)

FFamilyPDEase_I(131.1.1.1)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal
Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00233PDEase_I

3'5'-cyclic nucleotide phosphodiesterase

ClanCL0237HD_PDEase

External Links

ECOD PDB View: 5VYD RCSB PDB: 5VYD PDBe: 5VYD UniProt: F2TZN0

Downloads

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