ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5mi6A4 - ECOD Domain | ECOD

ECOD/Domains/e5mi6A4

e5mi6A4

UID: 002130257

PDB

Range: A:127-437
PDB: 5MI6 chain A(all domains)
UniProt: Q89ZI2 (all domains)
Gene: BT_4395

Molecule: O-GlcNAcase BT_4395

3D Structure

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Related Domains

Browse other domains in NAGidase →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyNAGidase(2002.1.1.150)

Ligands

in contact, ≤ 4 Å

~{N}-(4-ethoxyquinazolin-2-yl)propanamide7NQ
(3AR,5R,6S,7R,7AR)-2-(ETHYLAMINO)-5-(HYDROXYMETHYL)-5,6,7,7A-TETRAHYDRO-3AH-PYRANO[3,2-D][1,3]THIAZOLE-6,7-DIOLNHT

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Pfam Families

PF07555NAGidase

beta-N-acetylglucosaminidase

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 5MI6 RCSB PDB: 5MI6 PDBe: 5MI6 UniProt: Q89ZI2

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.