ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ndfD2 - ECOD Domain | ECOD

ECOD/Domains/e5ndfD2

e5ndfD2

UID: 002130331

PDB

Range: D:75-423
PDB: 5NDF chain D(all domains)
UniProt: Q10471 (all domains)
Gene: GALNT2

Molecule: Polypeptide N-acetylgalactosaminyltransferase 2

3D Structure

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Related Domains

Browse other domains in Glycos_transf_2,Glyco_transf_7C →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupNucleotide-diphospho-sugar transferases(7516)

HH-groupNucleotide-diphospho-sugar transferases(7516.1)

TT-groupNucleotide-diphospho-sugar transferases(7516.1.1)

FFamilyGlycos_transf_2,Glyco_transf_7C(7516.1.1.3)

Ligands

in contact, ≤ 4 Å

LuteolinLU2
drugDrugBank DB15584
Uridine-5'-DiphosphateUDP
drugDrugBank DB03435

Pfam Families

PF00535Glycos_transf_2

Glycosyl transferase family 2

ClanCL0110GT-A

PF02709Glyco_transf_7C

N-terminal domain of galactosyltransferase

ClanCL0110GT-A

External Links

ECOD PDB View: 5NDF RCSB PDB: 5NDF PDBe: 5NDF UniProt: Q10471

Downloads

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MANGANESE (II) ION

metal

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.