ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5v5xC5 - ECOD Domain | ECOD

ECOD/Domains/e5v5xC5

e5v5xC5

UID: 002130638

PDB

Range: C:412-523
PDB: 5V5X chain C(all domains)
UniProt: Q91XX3 (all domains)
Gene: Pcdhgb7

Molecule: MCG133388, isoform CRA_y

3D Structure

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Related Domains

Browse other domains in Cadherin →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyCadherin(11.1.1.1)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141
Calcium ionCA
metal
alpha-D-mannopyranoseMAN

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00028Cadherin

Cadherin domain

ClanCL0159E-set

External Links

ECOD PDB View: 5V5X RCSB PDB: 5V5X PDBe: 5V5X UniProt: Q91XX3

Downloads

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