ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5vt2A1 - ECOD Domain | ECOD

ECOD/Domains/e5vt2A1

e5vt2A1

UID: 002130713

PDB

Range: A:5-112
PDB: 5VT2 chain A(all domains)
UniProt: Q99988 (all domains)
Gene: GDF15

Molecule: Growth/differentiation factor 15

3D Structure

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Related Domains

Browse other domains in TGF_beta →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupCystine-knot cytokines(385)

HH-groupCystine-knot cytokines(385.1)

TT-groupCystine-knot cytokines(385.1.1)

FFamilyTGF_beta(385.1.1.2)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00019TGF_beta

Transforming growth factor beta like domain

ClanCL0079Cystine-knot

External Links

ECOD PDB View: 5VT2 RCSB PDB: 5VT2 PDBe: 5VT2 UniProt: Q99988

Downloads

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