ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5vxcA1 - ECOD Domain | ECOD

ECOD/Domains/e5vxcA1

e5vxcA1

UID: 002130715

PDB

Range: A:40-340
PDB: 5VXC chain A(all domains)
UniProt: Q8N0X4 (all domains)
Gene: CLYBL

Molecule: Citrate lyase subunit beta-like protein, mitochondrial

3D Structure

Loading viewer...

Related Domains

Browse other domains in HpcH_HpaI →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyHpcH_HpaI(2002.1.1.111)

Ligands

in contact, ≤ 4 Å

Coenzyme ACOA
drugDrugBank DB01992
Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF03328HpcH_HpaI

HpcH/HpaI aldolase/citrate lyase

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 5VXC RCSB PDB: 5VXC PDBe: 5VXC UniProt: Q8N0X4

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure