ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5vxsB1 - ECOD Domain | ECOD

ECOD/Domains/e5vxsB1

e5vxsB1

UID: 002130720

PDB

Range: B:40-338
PDB: 5VXS chain B(all domains)
UniProt: Q8N0X4 (all domains)
Gene: CLYBL

Molecule: Citrate lyase subunit beta-like protein, mitochondrial

3D Structure

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Related Domains

Browse other domains in HpcH_HpaI →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyHpcH_HpaI(2002.1.1.111)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Citric acid)

Citric acidCIT
DrugBank DB04272

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF03328HpcH_HpaI

HpcH/HpaI aldolase/citrate lyase

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 5VXS RCSB PDB: 5VXS PDBe: 5VXS UniProt: Q8N0X4

Downloads

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