ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5lyoB1 - ECOD Domain | ECOD

ECOD/Domains/e5lyoB1

e5lyoB1

UID: 002132596

PDB

Range: B:604-613,B:615-855
PDB: 5LYO chain B(all domains)
UniProt: Q9Y5Y6 (all domains)
Gene: ST14

Molecule: Suppressor of tumorigenicity 14 protein

3D Structure

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Related Domains

Browse other domains in Trypsin →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupFMN-binding split barrel 2(1.1.17)

FFamilyTrypsin(1.1.17.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00089Trypsin

Trypsin

ClanCL0124Peptidase_PA

External Links

ECOD PDB View: 5LYO RCSB PDB: 5LYO PDBe: 5LYO UniProt: Q9Y5Y6

Downloads

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