ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5nbpB1 - ECOD Domain | ECOD

ECOD/Domains/e5nbpB1

e5nbpB1

UID: 002132643

PDB

Range: B:35-271
PDB: 5NBP chain B(all domains)
UniProt: A7LY25 (all domains)

Molecule: Glycosyl hydrolase family 16

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_16 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupConcanavalin A-like(10.1)

TT-groupConcanavalin A-like lectins/glucanases(10.1.1)

FFamilyGlyco_hydro_16(10.1.1.11)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00722Glyco_hydro_16

Glycosyl hydrolases family 16

ClanCL0004Concanavalin

External Links

ECOD PDB View: 5NBP RCSB PDB: 5NBP PDBe: 5NBP UniProt: A7LY25

Downloads

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