ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5nuqF1 - ECOD Domain | ECOD

ECOD/Domains/e5nuqF1

e5nuqF1

UID: 002132697

PDB

Range: F:1-340
PDB: 5NUQ chain F(all domains)
UniProt: P02931 (all domains)
Gene: ompF

Molecule: Outer membrane protein F

3D Structure

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Related Domains

Browse other domains in Porin_1 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOuter membrane meander beta-barrels(5084)

HH-groupPorins(5084.5)

TT-groupPorin(5084.5.1)

FFamilyPorin_1(5084.5.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive ((Hydroxyethyloxy)Tri(Ethyloxy)Octane)

(Hydroxyethyloxy)Tri(Ethyloxy)OctaneC8E
DrugBank DB04233

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00267Porin_1

Gram-negative porin

ClanCL0193MBB

External Links

ECOD PDB View: 5NUQ RCSB PDB: 5NUQ PDBe: 5NUQ UniProt: P02931

Downloads

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