ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5nurA1 - ECOD Domain | ECOD

ECOD/Domains/e5nurA1

e5nurA1

UID: 002132699

PDB

Range: A:1-340
PDB: 5NUR chain A(all domains)
UniProt: P02931 (all domains)
Gene: ompF

Molecule: Outer membrane protein F

3D Structure

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Related Domains

Browse other domains in Porin_1 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOuter membrane meander beta-barrels(5084)

HH-groupPorins(5084.5)

TT-groupPorin(5084.5.1)

FFamilyPorin_1(5084.5.1.1)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

+ 2 additives ((Hydroxyethyloxy)Tri(Ethyloxy)Octane, Sulfate ion)

(Hydroxyethyloxy)Tri(Ethyloxy)OctaneC8E
DrugBank DB04233

Pfam Families

PF00267Porin_1

Gram-negative porin

ClanCL0193MBB

External Links

ECOD PDB View: 5NUR RCSB PDB: 5NUR PDBe: 5NUR UniProt: P02931

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Sulfate ion

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.