ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5oglA1 - ECOD Domain | ECOD

ECOD/Domains/e5oglA1

e5oglA1

UID: 002132747

PDB

Range: A:439-592,A:674-711
PDB: 5OGL chain A(all domains)
UniProt: B9KDD4 (all domains)
Gene: pglB

Molecule: Undecaprenyl-diphosphooligosaccharide--protein glycotransferase

3D Structure

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Related Domains

Browse other domains in STT3-PglB_core →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupSTT3/PglB/AglB core domain(3110)

HH-groupSTT3/PglB/AglB core domain(3110.1)

TT-groupSTT3/PglB/AglB core domain(3110.1.1)

FFamilySTT3-PglB_core(3110.1.1.2)

Ligands

in contact, ≤ 4 Å

[(2~{S},3~{R},4~{R},5~{S},6~{R})-3-acetamido-6-(hydroxymethyl)-4,5-bis(oxidanyl)oxan-2-yl]methyl-[oxidanyl-[(2~{Z},6~{Z},10~{Z})-3,7,11,15-tetramethylhexadeca-2,6,10,14-tetraenoxy]phosphoryl]oxy-phosphinic acid9UB
MANGANESE (II) IONMN
metal

Shown in the structure viewer.

Pfam Families

PF21436STT3-PglB_core

STT3/PglB/AglB core domain

ClanCL0801OST_core

External Links

ECOD PDB View: 5OGL RCSB PDB: 5OGL PDBe: 5OGL UniProt: B9KDD4

Downloads

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Drug annotations from DrugDomain.