ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5w4mB1 - ECOD Domain | ECOD

ECOD/Domains/e5w4mB1

e5w4mB1

UID: 002132902

PDB

Range: B:69-280
PDB: 5W4M chain B(all domains)
UniProt: A0A0J9X288 (all domains)
Gene: mutR

Molecule: Transcriptional regulator

3D Structure

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Related Domains

Browse other domains in Rgg_C →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyRgg_C(109.4.1.275)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
Potassium ionK
metal
Thiocyanate ionSCN

+ 2 additives (Dimethyl sulfoxide, Glycerin)

Pfam Families

HTH-type transcriptional regulator Rgg, C-terminal domain

ClanCL0020TPR

External Links

ECOD PDB View: 5W4M RCSB PDB: 5W4M PDBe: 5W4M UniProt: A0A0J9X288

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Dimethyl sulfoxideDMS

DrugBank DB01093

GlycerinGOL

DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.