ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5wmbA3 - ECOD Domain | ECOD

ECOD/Domains/e5wmbA3

e5wmbA3

UID: 002133182

PDB

Range: A:545-609
PDB: 5WMB chain A(all domains)
UniProt: P12689 (all domains)
Gene: REV1

Molecule: DNA repair protein REV1

3D Structure

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Related Domains

Browse other domains in IMS_HHH_1 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHhH/H2TH(102)

HH-groupSAM/DNA-glycosylase(102.1)

TT-groupSAM domain-like(102.1.1)

FFamilyIMS_HHH_1(102.1.1.51)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal

+ 2 additives (Glycerin, 1,2-ETHANEDIOL)

GlycerinGOL
DrugBank DB09462
1,2-ETHANEDIOL

Pfam Families

PF21999IMS_HHH_1

DNA polymerase-iota, thumb domain

ClanCL0198HHH

External Links

ECOD PDB View: 5WMB RCSB PDB: 5WMB PDBe: 5WMB UniProt: P12689

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.