ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5okuA1 - ECOD Domain | ECOD

ECOD/Domains/e5okuA1

e5okuA1

UID: 002136553

PDB

Range: A:36-133,A:261-334
PDB: 5OKU chain A(all domains)
UniProt: Q6N193 (all domains)
Gene: RPA4515

Molecule: Uncharacterized protein family UPF0065:Tat pathway signal

3D Structure

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Related Domains

Browse other domains in TctC →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilyTctC(7523.1.1.14)

Ligands

in contact, ≤ 4 Å

hexanedioic acid0L1

+ 2 additives (Glycerin, Sulfate ion)

GlycerinGOL
DrugBank DB09462
Sulfate ionSO4

Pfam Families

Tripartite tricarboxylate transporter family receptor

ClanCL0177PBP

External Links

ECOD PDB View: 5OKU RCSB PDB: 5OKU PDBe: 5OKU UniProt: Q6N193

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.