ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ot0B2 - ECOD Domain | ECOD

ECOD/Domains/e5ot0B2

e5ot0B2

UID: 002136567

PDB

Range: B:1-193
PDB: 5OT0 chain B(all domains)
UniProt: Q5JIW4 (all domains)
Gene: TK1656

Molecule: L-asparaginase

3D Structure

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Related Domains

Browse other domains in Asparaginase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupGlutaminase/Asparaginase N-terminal domain(7546)

HH-groupGlutaminase/Asparaginase N-terminal domain(7546.1)

TT-groupGlutaminase/Asparaginase N-terminal domain(7546.1.1)

FFamilyAsparaginase(7546.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 3 additives (Phosphate ion, 1,2-ETHANEDIOL, Tetraethylene glycol)

Phosphate ionPO4
DrugBank DB14523
1,2-ETHANEDIOLEDO
Tetraethylene glycolPG4

Pfam Families

PF00710Asparaginase

Asparaginase, N-terminal

External Links

ECOD PDB View: 5OT0 RCSB PDB: 5OT0 PDBe: 5OT0 UniProt: Q5JIW4

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.