ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5y02L1 - ECOD Domain | ECOD

ECOD/Domains/e5y02L1

e5y02L1

UID: 002137824

PDB

Range: L:3-106
PDB: 5Y02 chain L(all domains)
UniProt: A0A1L7NZN4 (all domains)
Gene: PeHNL

Molecule: Hydroxynitrile lyase

3D Structure

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Related Domains

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Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupDimeric alpha+beta barrel(304.4)

TT-groupDimeric alpha+beta barrel(304.4.1)

FFamilyDabb(304.4.1.14)

Ligands

in contact, ≤ 4 Å

Hexane-1,6-DiolHEZ
drugDrugBank DB02210
benzaldehydeHBX
(2R)-hydroxy(phenyl)ethanenitrileMXN

Pfam Families

Stress responsive A/B Barrel Domain

ClanCL0032Dim_A_B_barrel

External Links

ECOD PDB View: 5Y02 RCSB PDB: 5Y02 PDBe: 5Y02 UniProt: A0A1L7NZN4

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.