ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5na6A1 - ECOD Domain | ECOD

ECOD/Domains/e5na6A1

e5na6A1

UID: 002138587

PDB

Range: A:24-675
PDB: 5NA6 chain A(all domains)
UniProt: Q8A6N1 (all domains)
Gene: BT_1846

Molecule: Putative dipeptidyl-peptidase III

3D Structure

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Related Domains

Browse other domains in Peptidase_M49 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupZincin-like(2498)

HH-groupMetalloproteases ("zincins") catalytic domain(2498.1)

TT-groupMetalloproteases ("zincins") catalytic domain(2498.1.1)

FFamilyPeptidase_M49(2498.1.1.23)

Ligands

in contact, ≤ 4 Å

Sodium ionNA
metal
Zinc ionZN
metal

+ 3 additives (Acetate, Tromethamine, 3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL)

AcetateACT

Pfam Families

PF03571Peptidase_M49

Peptidase family M49

ClanCL0126Peptidase_MA

External Links

ECOD PDB View: 5NA6 RCSB PDB: 5NA6 PDBe: 5NA6 UniProt: Q8A6N1

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14511

TromethamineTRS

DrugBank DB03754

3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOLPE3

Shown in the structure viewer. Drug annotations from DrugDomain.