ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5nm9B1 - ECOD Domain | ECOD

ECOD/Domains/e5nm9B1

e5nm9B1

UID: 002138602

PDB

Range: B:8-130
PDB: 5NM9 chain B(all domains)
UniProt: B3S7S5 (all domains)
Gene: TRIADDRAFT_30731

Molecule: Mothers against decapentaplegic homolog

3D Structure

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Related Domains

Browse other domains in MH1 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupHis-Me finger endonucleases(378)

HH-groupHis-Me finger endonucleases(378.1)

TT-groupHis-Me finger endonucleases(378.1.1)

FFamilyMH1(378.1.1.4)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

MH1 domain

ClanCL0263His-Me_finger

External Links

ECOD PDB View: 5NM9 RCSB PDB: 5NM9 PDBe: 5NM9 UniProt: B3S7S5

Downloads

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