ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5lq1A2 - ECOD Domain | ECOD

ECOD/Domains/e5lq1A2

e5lq1A2

UID: 002140304

PDB

Range: A:101-205
PDB: 5LQ1 chain A(all domains)
UniProt: Q119I9 (all domains)
Gene: Tery_0366

Molecule: Phosphonate ABC transporter, periplasmic phosphonate-binding protein

3D Structure

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Related Domains

Browse other domains in Phosphonate-bd →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilyPhosphonate-bd(7523.1.1.25)

Ligands

in contact, ≤ 4 Å

Methylphosphonic acid ester groupGB

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF12974Phosphonate-bd

ABC transporter, phosphonate, periplasmic substrate-binding protein

ClanCL0177PBP

External Links

ECOD PDB View: 5LQ1 RCSB PDB: 5LQ1 PDBe: 5LQ1 UniProt: Q119I9

Downloads

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