ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5udmB1 - ECOD Domain | ECOD

ECOD/Domains/e5udmB1

e5udmB1

UID: 002141405

PDB

Range: B:163-254
PDB: 5UDM chain B(all domains)
UniProt: J7M5V6 (all domains)

Molecule: Phage-associated cell wall hydrolase

3D Structure

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Related Domains

Browse other domains in SH3_5 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupSH3(4)

HH-groupSH3(4.1)

TT-groupSH3(4.1.1)

FFamilySH3_5(4.1.1.59)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Bacterial SH3 domain

ClanCL0010SH3

External Links

ECOD PDB View: 5UDM RCSB PDB: 5UDM PDBe: 5UDM UniProt: J7M5V6

Downloads

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