ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6b3eA1 - ECOD Domain | ECOD

ECOD/Domains/e6b3eA1

e6b3eA1

UID: 002141507

PDB

Range: A:717-1036
PDB: 6B3E chain A(all domains)
UniProt: Q9NYV4 (all domains)
Gene: CDK12

Molecule: Cyclin-dependent kinase 12

3D Structure

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Related Domains

Browse other domains in Pkinase, ABC1 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupProtein kinase/SAICAR synthase/ATP-grasp(206)

HH-groupProtein kinase/SAICAR synthase/ATP-grasp(206.1)

TT-groupProtein kinase(206.1.1)

FFamilyPkinase, ABC1(206.1.1.70)

Ligands

in contact, ≤ 4 Å

2-[(2S)-1-(6-{[(4,5-difluoro-1H-benzimidazol-2-yl)methyl]amino}-9-ethyl-9H-purin-2-yl)piperidin-2-yl]ethan-1-olCJM
Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00069Pkinase

Protein kinase domain

ClanCL0016PKinase

ABC1 atypical kinase-like domain

ClanCL0016PKinase

External Links

ECOD PDB View: 6B3E RCSB PDB: 6B3E PDBe: 6B3E UniProt: Q9NYV4

Downloads

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