ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5na1A1 - ECOD Domain | ECOD

ECOD/Domains/e5na1A1

e5na1A1

UID: 002141719

PDB

Range: A:5-105,A:257-402
PDB: 5NA1 chain A(all domains)
UniProt: Q2FZV7 (all domains)
Gene: SAOUHSC_00878

Molecule: NADH dehydrogenase-like protein SAOUHSC_00878

3D Structure

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Related Domains

Browse other domains in Pyr_redox_2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupFAD/NAD(P)-binding domain(2003.1.2)

FFamilyPyr_redox_2(2003.1.2.24)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147

+ 1 additive (Malonate Ion)

Malonate IonMLI
DrugBank DB02201

Shown in the structure viewer.

Pfam Families

PF07992Pyr_redox_2

Pyridine nucleotide-disulphide oxidoreductase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 5NA1 RCSB PDB: 5NA1 PDBe: 5NA1 UniProt: Q2FZV7

Downloads

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Drug annotations from DrugDomain.