ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5vonA1 - ECOD Domain | ECOD

ECOD/Domains/e5vonA1

e5vonA1

UID: 002142017

PDB

Range: A:367-648
PDB: 5VON chain A(all domains)
UniProt: Q5SKM5 (all domains)
Gene: TTHA0618

Molecule: 5-methyltetrahydrofolate homocysteine S-methyltransferase

3D Structure

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Related Domains

Browse other domains in Pterin_bind →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyPterin_bind(2002.1.1.36)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00809Pterin_bind

Pterin binding enzyme

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 5VON RCSB PDB: 5VON PDBe: 5VON UniProt: Q5SKM5

Downloads

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